2-Trifluoroacetylthiophene oxadiazoles as potent and selective class II human histone deacetylase inhibitors

Bioorg Med Chem Lett. 2008 Dec 1;18(23):6083-7. doi: 10.1016/j.bmcl.2008.09.076. Epub 2008 Sep 24.

Abstract

Trifluoroacetylthiophene carboxamides have recently been reported to be class II HDAC inhibitors, with moderate selectivity. Exploration of replacements for the carboxamide with bioisosteric pentatomic heteroaromatic like 1,3,4-oxadiazoles, 1,2,4-oxadiazoles and 1,3-thiazoles, led to the discovery that 2-trifluoroacetylthiophene 1,3,4-oxadiazole derivatives are very potent low nanomolar HDAC4 inhibitors, highly selective over class I HDACs (HDAC 1 and 3), and moderately stable in HCT116 cell culture.

MeSH terms

  • Combinatorial Chemistry Techniques
  • Drug Design
  • HCT116 Cells
  • Histone Acetyltransferases / antagonists & inhibitors
  • Histone Deacetylase Inhibitors*
  • Histone Deacetylases / classification
  • Humans
  • Molecular Structure
  • Oxadiazoles / chemical synthesis*
  • Oxadiazoles / chemistry
  • Oxadiazoles / pharmacology*
  • Structure-Activity Relationship
  • Thiophenes / chemical synthesis*
  • Thiophenes / chemistry
  • Thiophenes / pharmacology*

Substances

  • Histone Deacetylase Inhibitors
  • Oxadiazoles
  • Thiophenes
  • Histone Acetyltransferases
  • Histone Deacetylases